ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3rq4A1 - ECOD Domain | ECOD

ECOD/Domains/e3rq4A1

e3rq4A1

UID: 000143431

PDB

Range: A:4-243
PDB: 3RQ4 chain A(all domains)
UniProt: Q86Y97 (all domains)
Gene: KMT5C

Molecule: Histone-lysine N-methyltransferase SUV420H2

3D Structure

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Related Domains

Browse other domains in SET →

Classification

AArchitecturebeta barrels(a.1)

XX-groupbeta-clip(70)

HH-groupSET domain-like(70.3)

TT-groupSET domain-like(70.3.1)

FFamilySET(70.3.1.1)

Ligands

in contact, ≤ 4 Å

AdemetionineSAM
drugDrugBank DB00118
Unknown atom or ionUNX
Zinc ionZN

Pfam Families

SET domain

ClanCL0489SAF

External Links

ECOD PDB View: 3RQ4 RCSB PDB: 3RQ4 PDBe: 3RQ4 UniProt: Q86Y97

Downloads

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metal

+ 1 additive (1,2-ETHANEDIOL)

1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.