ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3s8iA1 - ECOD Domain | ECOD

ECOD/Domains/e3s8iA1

e3s8iA1

UID: 000143792

RepresentativePDB

Range: A:241-367
PDB: 3S8I chain A(all domains)
UniProt: Q8WTU0 (all domains)
Gene: DDI1

Molecule: Protein DDI1 homolog 1

3D Structure

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Related Domains

Browse other domains in Asp_protease →

Classification

AArchitecturebeta barrels(a.1)

XX-groupcradle loop barrel(1)

HH-groupRIFT-related(1.1)

TT-groupacid protease(1.1.1)

FFamilyAsp_protease(1.1.1.6)

Ligands

in contact, ≤ 4 Å

Unknown atom or ionUNX

+ 2 additives (Phosphate ion, 1,2-ETHANEDIOL)

Phosphate ionPO4
DrugBank DB14523
1,2-ETHANEDIOLEDO

Pfam Families

PF09668Asp_protease

Aspartyl protease

ClanCL0129Peptidase_AA

External Links

ECOD PDB View: 3S8I RCSB PDB: 3S8I PDBe: 3S8I UniProt: Q8WTU0

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.