ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3sx0A1 - ECOD Domain | ECOD

ECOD/Domains/e3sx0A1

e3sx0A1

UID: 000143991

PDB

Range: A:4-332
PDB: 3SX0 chain A(all domains)
UniProt: Q8TEK3 (all domains)
Gene: DOT1L

Molecule: Histone-lysine N-methyltransferase, H3 lysine-79 specific

3D Structure

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Related Domains

Browse other domains in DOT1 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupS-adenosyl-L-methionine-dependent methyltransferases(2003.1.5)

FFamilyDOT1(2003.1.5.65)

Ligands

in contact, ≤ 4 Å

(2S)-2-amino-4-({[(2S,3S,4R,5R)-5-(4-amino-5-bromo-7H-pyrrolo[2,3-d]pyrimidin-7-yl)-3,4-dihydroxytetrahydrofuran-2-yl]methyl}sulfanyl)butanoic acid (non-preferred name)SX0
Unknown atom or ionUNX

+ 1 additive (Sulfate ion)

Sulfate ion

Pfam Families

Histone methylation protein DOT1

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 3SX0 RCSB PDB: 3SX0 PDBe: 3SX0 UniProt: Q8TEK3

Downloads

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DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.