ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4d7qA1 - ECOD Domain | ECOD

ECOD/Domains/e4d7qA1

e4d7qA1

UID: 001488776

PDB

Range: A:2-197
PDB: 4D7Q chain A(all domains)
UniProt: Q8RT31 (all domains)
Gene: ralF

Molecule: RALF, PROLINE/BETAINE TRANSPORTER

3D Structure

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Related Domains

Browse other domains in Sec7 →

Classification

AArchitecturealpha arrays(a.6)

XX-groupSec7 domain(168)

HH-groupSec7 domain(168.1)

TT-groupSec7 domain(168.1.1)

FFamilySec7(168.1.1.1)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 4 additives (HEPES, Glycerin, Nitrate, …)

HEPESEPE
DrugBank DB16872
GlycerinGOL
DrugBank DB09462
Nitrate

Pfam Families

Sec7 domain

External Links

ECOD PDB View: 4D7Q RCSB PDB: 4D7Q PDBe: 4D7Q UniProt: Q8RT31

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB14049

DI(HYDROXYETHYL)ETHERPEG

Shown in the structure viewer. Drug annotations from DrugDomain.