ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4de8A2 - ECOD Domain | ECOD

ECOD/Domains/e4de8A2

e4de8A2

UID: 000149220

PDB

Range: A:98-199
PDB: 4DE8 chain A(all domains)
UniProt: Q9ZII9 (all domains)
Gene: cps2A

Molecule: Cps2A

3D Structure

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Related Domains

Browse other domains in DNA_PPF →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupPeriplasmic binding protein-like II(7523)

HH-groupPeriplasmic binding protein-like II(7523.1)

TT-groupPeriplasmic binding protein-like II(7523.1.1)

FFamilyDNA_PPF(7523.1.1.12)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (DI(HYDROXYETHYL)ETHER)

DI(HYDROXYETHYL)ETHERPEG

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF02916DNA_PPF

DNA polymerase processivity factor

ClanCL0060DNA_clamp

External Links

ECOD PDB View: 4DE8 RCSB PDB: 4DE8 PDBe: 4DE8 UniProt: Q9ZII9

Downloads

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