ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4wq4C1 - ECOD Domain | ECOD

ECOD/Domains/e4wq4C1

e4wq4C1

UID: 001492361

PDB

Range: C:1-107
PDB: 4WQ4 chain C(all domains)
UniProt: P76256 (all domains)
Gene: tsaB

Molecule: tRNA threonylcarbamoyladenosine biosynthesis protein TsaB

3D Structure

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Related Domains

Browse other domains in TsaD →

Classification

AArchitecturemixed a+b and a/b(a.18)

XX-groupRibonuclease H-like(2484)

HH-groupRibonuclease H-like(2484.1)

TT-groupRibonuclease H-like(2484.1.1)

FFamilyTsaD(2484.1.1.10)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 3 additives (Glycerin, Acetate, DI(HYDROXYETHYL)ETHER)

GlycerinGOL
DrugBank DB09462
AcetateACT
DrugBank DB14511within 5 Å only
DI(HYDROXYETHYL)ETHER

Pfam Families

tRNA N6-adenosine threonylcarbamoyltransferase

ClanCL0108Actin_ATPase

External Links

ECOD PDB View: 4WQ4 RCSB PDB: 4WQ4 PDBe: 4WQ4 UniProt: P76256

Downloads

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