ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4r87H1 - ECOD Domain | ECOD

ECOD/Domains/e4r87H1

e4r87H1

UID: 001515504

PDB

Range: H:2-170
PDB: 4R87 chain H(all domains)
UniProt: Q9KL03 (all domains)
Gene: speG

Molecule: Spermidine n1-acetyltransferase

3D Structure

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Related Domains

Browse other domains in Acetyltransf_3 →

Classification

AArchitecturea+b three layers(a.12)

XX-groupNat/Ivy(213)

HH-groupAcyl-CoA N-acyltransferases (Nat)(213.1)

TT-groupAcyl-CoA N-acyltransferases (Nat)(213.1.1)

FFamilyAcetyltransf_3(213.1.1.25)

Ligands

in contact, ≤ 4 Å

Coenzyme ACOA
drugDrugBank DB01992
SpermineSPM
drugDrugBank DB00127

+ 1 additive (DI(HYDROXYETHYL)ETHER)

Pfam Families

PF13302Acetyltransf_3

Acetyltransferase (GNAT) domain

ClanCL0257Acetyltrans

External Links

ECOD PDB View: 4R87 RCSB PDB: 4R87 PDBe: 4R87 UniProt: Q9KL03

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DI(HYDROXYETHYL)ETHERPEG

Shown in the structure viewer. Drug annotations from DrugDomain.