ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4ef2B2 - ECOD Domain | ECOD

ECOD/Domains/e4ef2B2

e4ef2B2

UID: 001520176

PDB

Range: B:110-227
PDB: 4EF2 chain B(all domains)
UniProt: Q831K8 (all domains)
Gene: EF_2496

Molecule: Pheromone cOB1/lipoprotein, YaeC family

3D Structure

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Related Domains

Browse other domains in Lipoprotein_9 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupPeriplasmic binding protein-like II(7523)

HH-groupPeriplasmic binding protein-like II(7523.1)

TT-groupPeriplasmic binding protein-like II(7523.1.1)

FFamilyLipoprotein_9(7523.1.1.13)

Ligands

in contact, ≤ 4 Å

SelenomethionineMSE
drugDrugBank DB11142

+ 1 additive (DI(HYDROXYETHYL)ETHER)

DI(HYDROXYETHYL)ETHERPEG

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF03180Lipoprotein_9

NlpA lipoprotein

ClanCL0177PBP

External Links

ECOD PDB View: 4EF2 RCSB PDB: 4EF2 PDBe: 4EF2 UniProt: Q831K8

Downloads

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