ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e2f97A2 - ECOD Domain | ECOD

ECOD/Domains/e2f97A2

e2f97A2

UID: 001547142

PDB

Range: A:89-161,A:268-304
PDB: 2F97 chain A(all domains)
UniProt: O68014 (all domains)
Gene: benM

Molecule: HTH-type transcriptional regulator benM

3D Structure

Loading viewer...

Related Domains

Browse other domains in LysR_substrate →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupPeriplasmic binding protein-like II(7523)

HH-groupPeriplasmic binding protein-like II(7523.1)

TT-groupPeriplasmic binding protein-like II(7523.1.1)

FFamilyLysR_substrate(7523.1.1.15)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 3 additives (Acetate, DI(HYDROXYETHYL)ETHER, Tetraethylene glycol)

AcetateACT
DrugBank DB14511
DI(HYDROXYETHYL)ETHERPEG
Tetraethylene glycolPG4

Pfam Families

PF03466LysR_substrate

LysR substrate binding domain

ClanCL0177PBP

External Links

ECOD PDB View: 2F97 RCSB PDB: 2F97 PDBe: 2F97 UniProt: O68014

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Shown in the structure viewer. Drug annotations from DrugDomain.