ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4pg5B2 - ECOD Domain | ECOD

ECOD/Domains/e4pg5B2

e4pg5B2

UID: 001556732

PDB

Range: B:131-281
PDB: 4PG5 chain B(all domains)
UniProt: A0A0M3KKV6 (all domains)
Gene: U5K_01898

Molecule: Homoserine dehydrogenase

3D Structure

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Related Domains

Browse other domains in Homoserine_dh →

Classification

AArchitecturea+b two layers(a.11)

XX-groupFwdE/GAPDH domain-like(298)

HH-groupGlyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain(298.1)

TT-groupGlyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain(298.1.1)

FFamilyHomoserine_dh(298.1.1.2)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 3 additives (Acetate, Dimethyl sulfoxide, DI(HYDROXYETHYL)ETHER)

AcetateACT
DrugBank DB14511
Dimethyl sulfoxideDMS
DrugBank DB01093
DI(HYDROXYETHYL)ETHER

Pfam Families

PF00742Homoserine_dh

Homoserine dehydrogenase

ClanCL0139GADPH_aa-bio_dh

External Links

ECOD PDB View: 4PG5 RCSB PDB: 4PG5 PDBe: 4PG5 UniProt: A0A0M3KKV6

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.