ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4pg6B2 - ECOD Domain | ECOD

ECOD/Domains/e4pg6B2

e4pg6B2

UID: 001556772

PDB

Range: B:3-130,B:282-316
PDB: 4PG6 chain B(all domains)
UniProt: W8UB14 (all domains)
Gene: hom

Molecule: Homoserine dehydrogenase

3D Structure

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Related Domains

Browse other domains in NAD_binding_3 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupNAD(P)-binding Rossmann-fold domains(2003.1.1)

FFamilyNAD_binding_3(2003.1.1.43)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 3 additives (Glycerin, Acetate ion, DI(HYDROXYETHYL)ETHER)

GlycerinGOL
DrugBank DB09462
Acetate ionACT
DI(HYDROXYETHYL)ETHERPEG

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF03447NAD_binding_3

Homoserine dehydrogenase, NAD binding domain

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 4PG6 RCSB PDB: 4PG6 PDBe: 4PG6 UniProt: W8UB14

Downloads

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