ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4qnlA5 - ECOD Domain | ECOD

ECOD/Domains/e4qnlA5

e4qnlA5

UID: 001563555

RepresentativePDB

Range: A:169-249
PDB: 4QNL chain A(all domains)
UniProt: G0XNW5 (all domains)
Gene: gp63.1

Molecule: Tail fiber protein

3D Structure

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Related Domains

Browse other domains in Gp63_3rd_G7C →

Classification

AArchitecturebeta duplicates or obligate multimers(a.4)

XX-groupSingle-stranded right-handed beta-helix(207)

HH-groupPectin lyase-like(207.2)

TT-groupPectin lyase-like(207.2.1)

FFamilyGp63_3rd_G7C(207.2.1.30)

Ligands

in contact, ≤ 4 Å

Chloride ionCL

+ 2 additives (Sulfate ion, DI(HYDROXYETHYL)ETHER)

Sulfate ionSO4
DrugBank DB14546
DI(HYDROXYETHYL)ETHERPEG

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF21562Gp63_3rd_G7C

G7C, Tail fiber protein, domain 3

ClanCL0268Pec_lyase-like

External Links

ECOD PDB View: 4QNL RCSB PDB: 4QNL PDBe: 4QNL UniProt: G0XNW5

Downloads

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