ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4zakC2 - ECOD Domain | ECOD

ECOD/Domains/e4zakC2

e4zakC2

UID: 001564086

PDB

Range: C:2-115
PDB: 4ZAK chain C(all domains)
UniProt: A0A0G2JG46 (all domains)
Gene: Traj18

Molecule: Protein Trav11,Va14Ja18/Vb8.2,Human nkt tcr alpha chain

3D Structure

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Related Domains

Browse other domains in V-set →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupImmunoglobulin-like beta-sandwich(11)

HH-groupImmunoglobulin-related(11.1)

TT-groupImmunoglobulin/Fibronectin type III/E set domains/PapD-like(11.1.1)

FFamilyV-set(11.1.1.99)

Ligands

in contact, ≤ 4 Å

N-[(2S,3S,4R)-1-(alpha-D-galactopyranosyloxy)-3,4-dihydroxyoctadecan-2-yl]hexacosanethioamide4LX

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Immunoglobulin V-set domain

ClanCL0159E-set

External Links

ECOD PDB View: 4ZAK RCSB PDB: 4ZAK PDBe: 4ZAK UniProt: A0A0G2JG46

Downloads

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