ECODEvolutionary Classification of Protein Domains

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PDB 4ZAK

X-RAY DIFFRACTION2.82 Å4 chains7 ECOD domains

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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain AAntigen-presenting glycoprotein CD1d1view chain

2 domains

e4zakA1(A:186-279)e4zakA2(A:7-185)

Chain BBeta-2-microglobulinview chain

1 domain

e4zakB1(B:2-99)

Chain CProtein Trav11,Va14Ja18/Vb8.2,Human nkt tcr alpha chainview chain

2 domains

e4zakC1(C:116-204)e4zakC2(C:2-115)

Chain DT cell antigen receptor beta chain 8.2,T-cell receptor beta-2 chain C region,Protein Trbc2,T-cell receptor beta-2 chain C regionview chain

2 domains

e4zakD1(D:116-240)e4zakD2(D:2-115)

All Domains (7)

#	Chain	Domain ID	Range	Family	Classification
1	A	e4zakA1	A:186-279	C1-set	11 → 11.1 → 11.1.1
2	A	e4zakA2	A:7-185	MHC_I_3	233 → 233.1 → 233.1.1
3	B	e4zakB1	B:2-99	C1-set	11 → 11.1 → 11.1.1
4	C	e4zakC1	C:116-204	DUF1968	11 → 11.1 → 11.1.1
5	C	e4zakC2	C:2-115	V-set	11 → 11.1 → 11.1.1
6	D	e4zakD1	D:116-240	C1-set	11 → 11.1 → 11.1.1
7	D	e4zakD2	D:2-115	V-set	11 → 11.1 → 11.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors