ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5c0mB2 - ECOD Domain | ECOD

ECOD/Domains/e5c0mB2

e5c0mB2

UID: 001564337

PDB

Range: B:116-221
PDB: 5C0M chain B(all domains)
UniProt: Q96ES7 (all domains)
Gene: SGF29

Molecule: SAGA-associated factor 29 homolog

3D Structure

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Related Domains

Browse other domains in SGF29_Tudor →

Classification

AArchitecturebeta barrels(a.1)

XX-groupSH3(4)

HH-groupSH3(4.1)

TT-groupSH3(4.1.1)

FFamilySGF29_Tudor(4.1.1.51)

Ligands

in contact, ≤ 4 Å

Unknown atom or ionUNX

+ 2 additives (Glycerin, Sulfate ion)

GlycerinGOL
DrugBank DB09462
Sulfate ionSO4

Pfam Families

PF07039SGF29_Tudor

SGF29 tudor-like domain

ClanCL0010SH3

External Links

ECOD PDB View: 5C0M RCSB PDB: 5C0M PDBe: 5C0M UniProt: Q96ES7

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.