ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1y80A1 - ECOD Domain | ECOD

ECOD/Domains/e1y80A1

e1y80A1

UID: 000156556

PDB

Range: A:85-209
PDB: 1Y80 chain A(all domains)
UniProt: Q2RJ67 (all domains)
Gene: Moth_1208

Molecule: Predicted cobalamin binding protein

3D Structure

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Related Domains

Browse other domains in B12-binding →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupFlavodoxin-like(2007)

HH-groupClass I glutamine amidotransferase-like(2007.1)

TT-groupCheY-like(2007.1.3)

FFamilyB12-binding(2007.1.3.4)

Ligands

in contact, ≤ 4 Å

Vitamin B 12 factor IIImB1M
drugDrugBank DB02667
Unknown atom or ionUNX

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF02310B12-binding

B12 binding domain

External Links

ECOD PDB View: 1Y80 RCSB PDB: 1Y80 PDBe: 1Y80 UniProt: Q2RJ67

Downloads

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