ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4yt2B2 - ECOD Domain | ECOD

ECOD/Domains/e4yt2B2

e4yt2B2

UID: 001566296

RepresentativePDB

Range: B:206-353
PDB: 4YT2 chain B(all domains)
UniProt: Q58734 (all domains)
Gene: MJ1338

Molecule: H(2)-forming methylenetetrahydromethanopterin dehydrogenase-related protein MJ1338

3D Structure

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Related Domains

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Classification

AArchitecturealpha arrays(a.6)

XX-group6-phosphogluconate dehydrogenase C-terminal domain-like(129)

HH-group6-phosphogluconate dehydrogenase C-terminal domain-like(129.1)

TT-group6-phosphogluconate dehydrogenase C-terminal domain-like(129.1.1)

FFamilyHMD(129.1.1.8)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (DI(HYDROXYETHYL)ETHER)

DI(HYDROXYETHYL)ETHERPEG

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

H2-forming N5,N10-methylene-tetrahydromethanopterin dehydrogenase

ClanCL01066PGD_C

External Links

ECOD PDB View: 4YT2 RCSB PDB: 4YT2 PDBe: 4YT2 UniProt: Q58734

Downloads

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