ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4xesA1 - ECOD Domain | ECOD

ECOD/Domains/e4xesA1

e4xesA1

UID: 001569540

PDB

Range: A:1002-1161
PDB: 4XES chain A(all domains)
UniProt: P00720 (all domains)
Gene: E

Molecule: Neurotensin receptor type 1, Endolysin chimera

3D Structure

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Related Domains

Browse other domains in Phage_lysozyme →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupLysozyme-like(235)

HH-groupLysozyme-like(235.1)

TT-groupLysozyme-like(235.1.1)

FFamilyPhage_lysozyme(235.1.1.6)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 4 additives (Citric acid, Glycerin, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, …)

Citric acidCIT
DrugBank DB04272
GlycerinGOL
DrugBank DB09462
4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID

Pfam Families

PF00959Phage_lysozyme

Phage lysozyme

ClanCL0037Lysozyme

External Links

ECOD PDB View: 4XES RCSB PDB: 4XES PDBe: 4XES UniProt: P00720

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DI(HYDROXYETHYL)ETHERPEG

Shown in the structure viewer. Drug annotations from DrugDomain.