ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2pktA1 - ECOD Domain | ECOD

ECOD/Domains/e2pktA1

e2pktA1

UID: 000164289

PDB

Range: A:0-90
PDB: 2PKT chain A(all domains)
UniProt: O00151 (all domains)
Gene: PDLIM1

Molecule: PDZ and LIM domain protein 1

3D Structure

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Related Domains

Browse other domains in PDZ →

Classification

AArchitecturebeta barrels(a.1)

XX-groupPDZ domain(7)

HH-groupPDZ domain(7.1)

TT-groupPDZ domain(7.1.1)

FFamilyPDZ(7.1.1.1)

Ligands

in contact, ≤ 4 Å

Calcium ionCA
metal
Chloride ionCL

+ 3 additives (Acetate, DI(HYDROXYETHYL)ETHER, Tetraethylene glycol)

AcetateACT

Pfam Families

PDZ domain

ClanCL0466PDZ-like

External Links

ECOD PDB View: 2PKT RCSB PDB: 2PKT PDBe: 2PKT UniProt: O00151

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB14511

DI(HYDROXYETHYL)ETHERPEG

Tetraethylene glycolPG4

Shown in the structure viewer. Drug annotations from DrugDomain.