ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5c5uA1 - ECOD Domain | ECOD

ECOD/Domains/e5c5uA1

e5c5uA1

UID: 001688828

RepresentativePDB

Range: A:36-78,A:100-241
PDB: 5C5U chain A(all domains)
UniProt: Q84406 (all domains)
Gene: A085R

Molecule: Prolyl 4-hydroxylase

3D Structure

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Related Domains

Browse other domains in 2OG-FeII_Oxy_3 →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupjelly-roll(10)

HH-groupDouble-stranded beta-helix(10.12)

TT-groupDouble-stranded beta-helix(10.12.1)

FFamily2OG-FeII_Oxy_3(10.12.1.53)

Ligands

in contact, ≤ 4 Å

MANGANESE (II) IONMN
metal
Unknown atom or ionUNX

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF136402OG-FeII_Oxy_3

2OG-Fe(II) oxygenase superfamily

ClanCL0029Cupin

External Links

ECOD PDB View: 5C5U RCSB PDB: 5C5U PDBe: 5C5U UniProt: Q84406

Downloads

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