ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4p8iA1 - ECOD Domain | ECOD

ECOD/Domains/e4p8iA1

e4p8iA1

UID: 001691933

RepresentativePDB

Range: A:1-245
PDB: 4P8I chain A(all domains)
UniProt: P40746 (all domains)
Gene: tgl

Molecule: Protein-glutamine gamma-glutamyltransferase

3D Structure

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Related Domains

Browse other domains in TGL →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupCysteine proteinases-like(219)

HH-groupCysteine proteinases(219.1)

TT-groupCysteine proteinases(219.1.1)

FFamilyTGL(219.1.1.63)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 4 additives (Glycerin, Triethylene glycol, 1,2-ETHANEDIOL, …)

GlycerinGOL
DrugBank DB09462
Triethylene glycolPGE
DrugBank DB02327
1,2-ETHANEDIOL

Pfam Families

Protein-glutamine gamma-glutamyltransferase

ClanCL0125Peptidase_CA

External Links

ECOD PDB View: 4P8I RCSB PDB: 4P8I PDBe: 4P8I UniProt: P40746

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DI(HYDROXYETHYL)ETHERPEG

Shown in the structure viewer. Drug annotations from DrugDomain.