ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3x1dA2 - ECOD Domain | ECOD

ECOD/Domains/e3x1dA2

e3x1dA2

UID: 001697885

PDB

Range: A:3-72,A:92-319
PDB: 3X1D chain A(all domains)
UniProt: Q9VC57 (all domains)
Gene: atl

Molecule: Atlastin

3D Structure

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Related Domains

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Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilyGBP(2004.1.1.81)

Ligands

in contact, ≤ 4 Å

Guanosine-5'-DiphosphateGDP
drugDrugBank DB04315
Magnesium ionMG
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Guanylate-binding protein, N-terminal domain

ClanCL0023P-loop_NTPase

External Links

ECOD PDB View: 3X1D RCSB PDB: 3X1D PDBe: 3X1D UniProt: Q9VC57

Downloads

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