ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5d7nD1 - ECOD Domain | ECOD

ECOD/Domains/e5d7nD1

e5d7nD1

UID: 001715964

PDB

Range: D:121-245,D:289-392
PDB: 5D7N chain D(all domains)
UniProt: Q9NTG7 (all domains)
Gene: SIRT3

Molecule: NAD-dependent protein deacetylase sirtuin-3, mitochondrial

3D Structure

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Related Domains

Browse other domains in SIR2 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupDHS-like NAD/FAD-binding domain(2003.1.4)

FFamilySIR2(2003.1.4.5)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 3 additives (Glycerin, Pentaethylene glycol, DI(HYDROXYETHYL)ETHER)

GlycerinGOL
DrugBank DB09462
Pentaethylene glycol1PE
DI(HYDROXYETHYL)ETHERPEG

Pfam Families

Sir2 family

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 5D7N RCSB PDB: 5D7N PDBe: 5D7N UniProt: Q9NTG7

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.