ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5c7tA1 - ECOD Domain | ECOD

ECOD/Domains/e5c7tA1

e5c7tA1

UID: 001726003

PDB

Range: A:1-182
PDB: 5C7T chain A(all domains)
UniProt: Q6MIH8 (all domains)
Gene: nudF

Molecule: NudF protein

3D Structure

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Related Domains

Browse other domains in NUDIX →

Classification

AArchitecturea+b two layers(a.11)

XX-groupbeta-Grasp(221)

HH-groupNudix(221.4)

TT-groupNudix(221.4.1)

FFamilyNUDIX(221.4.1.1)

Ligands

in contact, ≤ 4 Å

ADENOSINE-5-DIPHOSPHORIBOSEAPR
2-(2-METHOXYETHOXY)ETHANOLPG0

+ 4 additives (Glycerin, Sulfate ion, Triethylene glycol, …)

GlycerinGOL

Pfam Families

NUDIX domain

ClanCL0261NUDIX

External Links

ECOD PDB View: 5C7T RCSB PDB: 5C7T PDBe: 5C7T UniProt: Q6MIH8

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB09462

Sulfate ionSO4

DrugBank DB14546

Triethylene glycolPGE

DrugBank DB02327within 5 Å only

DI(HYDROXYETHYL)ETHERPEG

Shown in the structure viewer. Drug annotations from DrugDomain.