ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4d3lB1 - ECOD Domain | ECOD

ECOD/Domains/e4d3lB1

e4d3lB1

UID: 001733946

PDB

Range: B:494-624
PDB: 4D3L chain B(all domains)
UniProt: A0A140UH31 (all domains)

Molecule: CARBOHYDRATE BINDING MODULE

3D Structure

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Related Domains

Browse other domains in DUF5620 →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupjelly-roll(10)

HH-groupGalactose-binding domain-like(10.32)

TT-groupGalactose-binding domain-like(10.32.1)

FFamilyDUF5620(10.32.1.63)

Ligands

in contact, ≤ 4 Å

Calcium ionCA
metal
(3S)-3-HYDROXYHEPTANEDIOIC ACIDHHD

+ 2 additives (Glycerin, DI(HYDROXYETHYL)ETHER)

GlycerinGOL

Pfam Families

PF18522DUF5620

Domain of unknown function (DUF5620)

ClanCL0202GBD

External Links

ECOD PDB View: 4D3L RCSB PDB: 4D3L PDBe: 4D3L UniProt: A0A140UH31

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB09462

DI(HYDROXYETHYL)ETHERPEG

Shown in the structure viewer. Drug annotations from DrugDomain.