ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4xr8F1 - ECOD Domain | ECOD

ECOD/Domains/e4xr8F1

e4xr8F1

UID: 001734552

PDB

Range: F:71-143
PDB: 4XR8 chain F(all domains)
UniProt: P03126 (all domains)
Gene: E6

Molecule: Protein E6

3D Structure

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Related Domains

Browse other domains in E6 →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupE6 C-terminal domain-like(4255)

HH-groupE6 C-terminal domain-like(4255.1)

TT-groupE6 C-terminal domain-like(4255.1.1)

FFamilyE6(4255.1.1.1)

Ligands

in contact, ≤ 4 Å

Zinc ionZN
metal

+ 2 additives (1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER)

1,2-ETHANEDIOLEDO
DI(HYDROXYETHYL)ETHERPEG

Pfam Families

Early Protein (E6)

External Links

ECOD PDB View: 4XR8 RCSB PDB: 4XR8 PDBe: 4XR8 UniProt: P03126

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.