ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5h9mB1 - ECOD Domain | ECOD

ECOD/Domains/e5h9mB1

e5h9mB1

UID: 001738945

PDB

Range: B:194-321
PDB: 5H9M chain B(all domains)
UniProt: O43255 (all domains)
Gene: SIAH2

Molecule: E3 ubiquitin-protein ligase SIAH2

3D Structure

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Related Domains

Browse other domains in Sina_TRAF →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupImmunoglobulin-like beta-sandwich(11)

HH-groupTRAF domain-like(11.10)

TT-groupTRAF domain-like(11.10.1)

FFamilySina_TRAF(11.10.1.1)

Ligands

in contact, ≤ 4 Å

Chloride ionCL
Unknown atom or ionUNX

+ 1 additive (Pentaethylene glycol)

Pentaethylene glycol1PE

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF03145Sina_TRAF

Sina, TRAF-like domain

ClanCL0389TRAF

External Links

ECOD PDB View: 5H9M RCSB PDB: 5H9M PDBe: 5H9M UniProt: O43255

Downloads

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