ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4zghA2 - ECOD Domain | ECOD

ECOD/Domains/e4zghA2

e4zghA2

UID: 001787921

PDB

Range: A:360-470
PDB: 4ZGH chain A(all domains)
UniProt: Q04IN8 (all domains)
Gene: ply

Molecule: Pneumolysin

3D Structure

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Related Domains

Browse other domains in Thiol_cytolys_C →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupImmunoglobulin-like beta-sandwich(11)

HH-groupPerfringolysin O beta sandwich domain(11.15)

TT-groupPerfringolysin O beta sandwich domain(11.15.1)

FFamilyThiol_cytolys_C(11.15.1.1)

Ligands

in contact, ≤ 4 Å

GOLD (I) CYANIDE IONAUC

+ 2 additives (1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER)

1,2-ETHANEDIOLEDO
DI(HYDROXYETHYL)ETHERPEG

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF17440Thiol_cytolys_C

Thiol-activated cytolysin beta sandwich domain

External Links

ECOD PDB View: 4ZGH RCSB PDB: 4ZGH PDBe: 4ZGH UniProt: Q04IN8

Downloads

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