ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3pz4A1 - ECOD Domain | ECOD

ECOD/Domains/e3pz4A1

e3pz4A1

UID: 000180854

PDB

Range: A:55-369
PDB: 3PZ4 chain A(all domains)
UniProt: Q04631 (all domains)
Gene: Fnta

Molecule: Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha

3D Structure

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Related Domains

Browse other domains in PPTA →

Classification

AArchitecturealpha superhelices(a.9)

XX-groupRepetitive alpha hairpins(109)

HH-groupARM repeat(109.4)

TT-groupARM repeat(109.4.1)

FFamilyPPTA(109.4.1.18)

Ligands

in contact, ≤ 4 Å

Farnesyl diphosphateFPP
drugDrugBank DB07780
(3R)-3-benzyl-4-[(4-methoxyphenyl)sulfonyl]-1-[(1-methyl-1H-imidazol-5-yl)methyl]-2,3,4,5-tetrahydro-1H-1,4-benzodiazepine-7-carbonitrile3PZ
within 5 Å only

Pfam Families

Protein prenyltransferase alpha subunit repeat

ClanCL0020TPR

External Links

ECOD PDB View: 3PZ4 RCSB PDB: 3PZ4 PDBe: 3PZ4 UniProt: Q04631

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.