ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3k5kB1 - ECOD Domain | ECOD

ECOD/Domains/e3k5kB1

e3k5kB1

UID: 001826125

PDB

Range: B:919-969,B:1036-1190
PDB: 3K5K chain B(all domains)
UniProt: Q96KQ7 (all domains)
Gene: EHMT2

Molecule: Histone-lysine N-methyltransferase, H3 lysine-9 specific 3

3D Structure

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Related Domains

Browse other domains in SET →

Classification

AArchitecturebeta barrels(a.1)

XX-groupbeta-clip(70)

HH-groupSET domain-like(70.3)

TT-groupSET domain-like(70.3.1)

FFamilySET(70.3.1.1)

Ligands

in contact, ≤ 4 Å

S-adenosyl-L-homocysteineSAH
drugDrugBank DB01752
Chloride ionCL
7-[3-(dimethylamino)propoxy]-6-methoxy-2-(4-methyl-1,4-diazepan-1-yl)-N-(1-methylpiperidin-4-yl)quinazolin-4-amineDXQ

Pfam Families

SET domain

ClanCL0489SAF

External Links

ECOD PDB View: 3K5K RCSB PDB: 3K5K PDBe: 3K5K UniProt: Q96KQ7

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Zinc ionZN

metal

Unknown atom or ionUNX

within 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.