ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5c94A1 - ECOD Domain | ECOD

ECOD/Domains/e5c94A1

e5c94A1

UID: 001844125

PDB

Range: A:1-111
PDB: 5C94 chain A(all domains)
UniProt: P0C6Y3 (all domains)
Gene: rep

Molecule: Non-structural protein 9

3D Structure

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Related Domains

Browse other domains in CoV_NSP9 →

Classification

AArchitecturebeta barrels(a.1)

XX-groupcradle loop barrel(1)

HH-groupRIFT-related(1.1)

TT-groupPhage tail proteins(1.1.13)

FFamilyCoV_NSP9(1.1.13.8)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 2 additives (Glycerin, DI(HYDROXYETHYL)ETHER)

GlycerinGOL
DrugBank DB09462
DI(HYDROXYETHYL)ETHERPEG

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF08710CoV_NSP9

Coronavirus replicase NSP9

ClanCL0504Phage_barrel

External Links

ECOD PDB View: 5C94 RCSB PDB: 5C94 PDBe: 5C94 UniProt: P0C6Y3

Downloads

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