ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4ac9C1 - ECOD Domain | ECOD

ECOD/Domains/e4ac9C1

e4ac9C1

UID: 001851167

RepresentativePDB

Range: C:1-179
PDB: 4AC9 chain C(all domains)
UniProt: Q8J307 (all domains)
Gene: selB

Molecule: MJ0495-LIKE PROTEIN

3D Structure

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Related Domains

Browse other domains in GTP_EFTU →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilyGTP_EFTU(2004.1.1.14)

Ligands

in contact, ≤ 4 Å

Deoxycholic acidDXC
drugDrugBank DB03619
Guanosine-5'-DiphosphateGDP
drugDrugBank DB04315

Pfam Families

PF00009GTP_EFTU

Elongation factor Tu GTP binding domain

ClanCL0023P-loop_NTPase

External Links

ECOD PDB View: 4AC9 RCSB PDB: 4AC9 PDBe: 4AC9 UniProt: Q8J307

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Magnesium ion

metal

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.