ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3iuuA1 - ECOD Domain | ECOD

ECOD/Domains/e3iuuA1

e3iuuA1

UID: 000185346

RepresentativePDB

Range: A:1-182
PDB: 3IUU chain A(all domains)
UniProt: Q11B79 (all domains)
Gene: Meso_3979

Molecule: Putative metallopeptidase

3D Structure

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Related Domains

Browse other domains in DUF1485 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupFlavodoxin-like(2007)

HH-groupN-terminal domain in a putative metallopeptidase YP_676511.1(2007.17)

TT-groupN-terminal domain in a putative metallopeptidase YP_676511.1(2007.17.1)

FFamilyDUF1485(2007.17.1.1)

Ligands

in contact, ≤ 4 Å

Zinc ionZN
metal

+ 4 additives (Imidazole, DI(HYDROXYETHYL)ETHER, Triethylene glycol, …)

ImidazoleIMD
DrugBank DB03366
DI(HYDROXYETHYL)ETHER

Pfam Families

PF07364DUF1485

Metallopeptidase family M81

External Links

ECOD PDB View: 3IUU RCSB PDB: 3IUU PDBe: 3IUU UniProt: Q11B79

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Triethylene glycolPGE

Sulfate ionSO4

Shown in the structure viewer. Drug annotations from DrugDomain.