ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5ke2A3 - ECOD Domain | ECOD

ECOD/Domains/e5ke2A3

e5ke2A3

UID: 001866654

PDB

Range: A:251-346
PDB: 5KE2 chain A(all domains)
UniProt: Q15047 (all domains)
Gene: SETDB1

Molecule: Histone-lysine N-methyltransferase SETDB1

3D Structure

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Related Domains

Browse other domains in Tudor_5 →

Classification

AArchitecturebeta barrels(a.1)

XX-groupSH3(4)

HH-groupSH3(4.1)

TT-groupSH3(4.1.1)

FFamilyTudor_5(4.1.1.129)

Ligands

in contact, ≤ 4 Å

Unknown atom or ionUNX

+ 2 additives (1,2-ETHANEDIOL, Sulfate ion)

1,2-ETHANEDIOLEDO
Sulfate ionSO4

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF18359Tudor_5

Histone methyltransferase Tudor domain 1

ClanCL0010SH3

External Links

ECOD PDB View: 5KE2 RCSB PDB: 5KE2 PDBe: 5KE2 UniProt: Q15047

Downloads

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