ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5kh4B1 - ECOD Domain | ECOD

ECOD/Domains/e5kh4B1

e5kh4B1

UID: 001867265

PDB

Range: B:15-244
PDB: 5KH4 chain B(all domains)
UniProt: Q97SR4 (all domains)
Gene: uppS

Molecule: Isoprenyl transferase

3D Structure

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Related Domains

Browse other domains in Prenyltransf →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupUndecaprenyl diphosphate synthase(7534)

HH-groupUndecaprenyl diphosphate synthase(7534.1)

TT-groupUndecaprenyl diphosphate synthase(7534.1.1)

FFamilyPrenyltransf(7534.1.1.1)

Ligands

in contact, ≤ 4 Å

Farnesyl diphosphateFPP
drugDrugBank DB07780

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF01255Prenyltransf

Putative undecaprenyl diphosphate synthase

External Links

ECOD PDB View: 5KH4 RCSB PDB: 5KH4 PDBe: 5KH4 UniProt: Q97SR4

Downloads

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