ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5d5sA1 - ECOD Domain | ECOD

ECOD/Domains/e5d5sA1

e5d5sA1

UID: 001871372

PDB

Range: A:262-397
PDB: 5D5S chain A(all domains)
UniProt: A0A0A5P8W7 (all domains)
Gene: megL

Molecule: Methionine gamma-lyase

3D Structure

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Related Domains

Browse other domains in Cys_Met_Meta_PP →

Classification

AArchitecturea+b two layers(a.11)

XX-groupC-terminal domain in some PLP-dependent transferases(3016)

HH-groupC-terminal domain in some PLP-dependent transferases(3016.1)

TT-groupC-terminal domain in some PLP-dependent transferases(3016.1.1)

FFamilyCys_Met_Meta_PP(3016.1.1.7)

Ligands

in contact, ≤ 4 Å

Pyridoxal phosphatePLP
drugDrugBank DB00114within 5 Å only

+ 1 additive (DI(HYDROXYETHYL)ETHER)

DI(HYDROXYETHYL)ETHERPEG

Shown in the structure viewer. Drug annotations from .

Pfam Families

PF01053Cys_Met_Meta_PP

Cys/Met metabolism PLP-dependent enzyme

ClanCL0061PLP_aminotran

External Links

ECOD PDB View: 5D5S RCSB PDB: 5D5S PDBe: 5D5S UniProt: A0A0A5P8W7

Downloads

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