ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5kh6A2 - ECOD Domain | ECOD

ECOD/Domains/e5kh6A2

e5kh6A2

UID: 001887048

PDB

Range: A:347-400
PDB: 5KH6 chain A(all domains)
UniProt: Q15047 (all domains)
Gene: SETDB1

Molecule: Histone-lysine N-methyltransferase SETDB1

3D Structure

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Related Domains

Browse other domains in Tudor_4 →

Classification

AArchitecturebeta barrels(a.1)

XX-groupSH3(4)

HH-groupSH3(4.1)

TT-groupSH3(4.1.1)

FFamilyTudor_4(4.1.1.128)

Ligands

in contact, ≤ 4 Å

methyl 3-(methylsulfonylamino)benzoate6SU

+ 3 additives (Dimethyl sulfoxide, 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER)

Dimethyl sulfoxideDMS
DrugBank DB01093
1,2-ETHANEDIOLEDO

Pfam Families

PF18358Tudor_4

Histone methyltransferase Tudor domain

ClanCL0010SH3

External Links

ECOD PDB View: 5KH6 RCSB PDB: 5KH6 PDBe: 5KH6 UniProt: Q15047

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DI(HYDROXYETHYL)ETHERPEG

Shown in the structure viewer. Drug annotations from DrugDomain.