ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5dwyA1 - ECOD Domain | ECOD

ECOD/Domains/e5dwyA1

e5dwyA1

UID: 001887686

PDB

Range: A:5-430
PDB: 5DWY chain A(all domains)
UniProt: Q5JID0 (all domains)
Gene: TK0986

Molecule: Proton/glutamate symporter, SDF family

3D Structure

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Related Domains

Browse other domains in SDF →

Classification

AArchitecturealpha complex topology(a.10)

XX-groupProton glutamate symport protein(5052)

HH-groupProton glutamate symport protein(5052.1)

TT-groupProton glutamate symport protein(5052.1.1)

FFamilySDF(5052.1.1.1)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 3 additives (Triethylene glycol, octyl beta-D-glucopyranoside, DI(HYDROXYETHYL)ETHER)

Triethylene glycolPGE
DrugBank DB02327
octyl beta-D-glucopyranosideBOG
DI(HYDROXYETHYL)ETHERPEG

Pfam Families

Sodium:dicarboxylate symporter family

External Links

ECOD PDB View: 5DWY RCSB PDB: 5DWY PDBe: 5DWY UniProt: Q5JID0

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.