ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5lo9A2 - ECOD Domain | ECOD

ECOD/Domains/e5lo9A2

e5lo9A2

UID: 001890616

PDB

Range: A:237-378
PDB: 5LO9 chain A(all domains)
UniProt: W0DW89 (all domains)
Gene: MARPU_02550

Molecule: Cytochrome C

3D Structure

Loading viewer...

Related Domains

Browse other domains in SoxA-TsdA_cyt-c →

Classification

AArchitecturealpha arrays(a.6)

XX-groupCytochrome c-like(107)

HH-groupCytochrome c(107.1)

TT-groupCytochrome c(107.1.1)

FFamilySoxA-TsdA_cyt-c(107.1.1.11)

Ligands

in contact, ≤ 4 Å

Ferroheme CHEC
drugDrugBank DB03317
Chloride ionCL
ThiosulfateTHJ

Pfam Families

PF21342SoxA-TsdA_cyt-c

SoxA/TsdA, cytochrome c domain

ClanCL0318Cytochrome-c

External Links

ECOD PDB View: 5LO9 RCSB PDB: 5LO9 PDBe: 5LO9 UniProt: W0DW89

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

+ 1 additive (1,2-ETHANEDIOL)

1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.