ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5lo9B2 - ECOD Domain | ECOD

ECOD/Domains/e5lo9B2

e5lo9B2

UID: 001890620

PDB

Range: B:240-378
PDB: 5LO9 chain B(all domains)
UniProt: W0DW89 (all domains)
Gene: MARPU_02550

Molecule: Cytochrome C

3D Structure

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Related Domains

Browse other domains in SoxA-TsdA_cyt-c →

Classification

AArchitecturealpha arrays(a.6)

XX-groupCytochrome c-like(107)

HH-groupCytochrome c(107.1)

TT-groupCytochrome c(107.1.1)

FFamilySoxA-TsdA_cyt-c(107.1.1.11)

Ligands

in contact, ≤ 4 Å

Ferroheme CHEC
drugDrugBank DB03317
(S)-propane-1,2-diolPGO
drugDrugBank DB04349
Chloride ion

Pfam Families

PF21342SoxA-TsdA_cyt-c

SoxA/TsdA, cytochrome c domain

ClanCL0318Cytochrome-c

External Links

ECOD PDB View: 5LO9 RCSB PDB: 5LO9 PDBe: 5LO9 UniProt: W0DW89

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

ThiosulfateTHJ

+ 1 additive (1,2-ETHANEDIOL)

1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.