ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5m11A1 - ECOD Domain | ECOD

ECOD/Domains/e5m11A1

e5m11A1

UID: 001916716

RepresentativePDB

Range: A:29-328
PDB: 5M11 chain A(all domains)
UniProt: Q9S3Q8 (all domains)

Molecule: Immunoreactive 84kD antigen PG93

3D Structure

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Related Domains

Browse other domains in PorZ_N_b_propeller →

Classification

AArchitecturebeta duplicates or obligate multimers(a.4)

XX-groupbeta-propeller-like(5)

HH-groupbeta-propeller(5.1)

TT-group7-bladed(5.1.4)

FFamilyPorZ_N_b_propeller(5.1.4.63)

Ligands

in contact, ≤ 4 Å

Chloride ionCL
Zinc ionZN
metal

+ 2 additives (Glycerin, DI(HYDROXYETHYL)ETHER)

GlycerinGOL

Pfam Families

PF21544PorZ_N_b_propeller

TSS9, PorZ, N-terminal beta-propeller domain

ClanCL0186Beta_propeller

External Links

ECOD PDB View: 5M11 RCSB PDB: 5M11 PDBe: 5M11 UniProt: Q9S3Q8

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB09462

DI(HYDROXYETHYL)ETHERPEG

Shown in the structure viewer. Drug annotations from DrugDomain.