ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5kkbB1 - ECOD Domain | ECOD

ECOD/Domains/e5kkbB1

e5kkbB1

UID: 001931106

PDB

Range: B:176-644
PDB: 5KKB chain B(all domains)
UniProt: P45700 (all domains)
Gene: Man1a1

Molecule: Mannosyl-oligosaccharide 1,2-alpha-mannosidase IA

3D Structure

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Related Domains

Browse other domains in Glyco_hydro_47 →

Classification

AArchitecturealpha superhelices(a.9)

XX-groupRepetitive alpha hairpins(109)

HH-groupalpha/alpha toroid(109.2)

TT-groupalpha/alpha toroid(109.2.1)

FFamilyGlyco_hydro_47(109.2.1.8)

Ligands

in contact, ≤ 4 Å

N-AcetylglucosamineNAG
drugDrugBank DB00141
3-PYRIDINIUM-1-YLPROPANE-1-SULFONATE1PS
LANTHANUM (III) IONLA

Pfam Families

PF01532Glyco_hydro_47

Glycosyl hydrolase family 47

ClanCL00596_Hairpin

External Links

ECOD PDB View: 5KKB RCSB PDB: 5KKB PDBe: 5KKB UniProt: P45700

Downloads

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metal

+ 1 additive (1,4-Butanediol)

1,4-ButanediolBU1
DrugBank DB01955

Shown in the structure viewer. Drug annotations from DrugDomain.