ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5u28A1 - ECOD Domain | ECOD

ECOD/Domains/e5u28A1

e5u28A1

UID: 002010682

PDB

Range: A:43-176
PDB: 5U28 chain A(all domains)
UniProt: O60885 (all domains)
Gene: BRD4

Molecule: Bromodomain-containing protein 4

3D Structure

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Related Domains

Browse other domains in Bromodomain →

Classification

AArchitecturealpha bundles(a.7)

XX-groupBromodomain-like(633)

HH-groupBromodomain(633.1)

TT-groupBromodomain(633.1.1)

FFamilyBromodomain(633.1.1.1)

Ligands

in contact, ≤ 4 Å

3-(2,3-dihydro-1,4-benzodioxin-6-yl)-5-(morpholin-4-yl)-7H-thieno[3,2-b]pyran-7-one82V
Thiocyanate ionSCN

+ 1 additive (DI(HYDROXYETHYL)ETHER)

DI(HYDROXYETHYL)ETHERPEG

Pfam Families

PF00439Bromodomain

Bromodomain

External Links

ECOD PDB View: 5U28 RCSB PDB: 5U28 PDBe: 5U28 UniProt: O60885

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.