ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5b3gB1 - ECOD Domain | ECOD

ECOD/Domains/e5b3gB1

e5b3gB1

UID: 002033722

PDB

Range: B:121-531
PDB: 5B3G chain B(all domains)
UniProt: Q9SZF7 (all domains)
Gene: SHR

Molecule: Protein SHORT-ROOT

3D Structure

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Related Domains

Browse other domains in GRAS →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupS-adenosyl-L-methionine-dependent methyltransferases(2003.1.5)

FFamilyGRAS(2003.1.5.31)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 2 additives (1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER)

1,2-ETHANEDIOLEDO
DI(HYDROXYETHYL)ETHERPEG

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

GRAS domain family

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 5B3G RCSB PDB: 5B3G PDBe: 5B3G UniProt: Q9SZF7

Downloads

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