ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5l4nC1 - ECOD Domain | ECOD

ECOD/Domains/e5l4nC1

e5l4nC1

UID: 002045178

PDB

Range: C:5-288
PDB: 5L4N chain C(all domains)
UniProt: Q01782 (all domains)
Gene: PTR1

Molecule: Pteridine reductase 1

3D Structure

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Related Domains

Browse other domains in short chain dehydrogenase / Enoyl-(Acyl carrier protein) reductase →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupNAD(P)-binding Rossmann-fold domains(2003.1.1)

FFamilyshort chain dehydrogenase / Enoyl-(Acyl carrier protein) reductase(2003.1.1.4)

Ligands

in contact, ≤ 4 Å

NADPHNDP
drugDrugBank DB02338
(2~{R})-2-(3-hydroxyphenyl)-6-oxidanyl-2,3-dihydrochromen-4-one6QT

+ 2 additives (Glycerin, DI(HYDROXYETHYL)ETHER)

Glycerin

Pfam Families

PF00106adh_short

short chain dehydrogenase

ClanCL0063NADP_Rossmann

PF13561adh_short_C2

Enoyl-(Acyl carrier protein) reductase

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 5L4N RCSB PDB: 5L4N PDBe: 5L4N UniProt: Q01782

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB09462

DI(HYDROXYETHYL)ETHERPEG

Shown in the structure viewer. Drug annotations from DrugDomain.