ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5ubbA1 - ECOD Domain | ECOD

ECOD/Domains/e5ubbA1

e5ubbA1

UID: 002046236

PDB

Range: A:59-278
PDB: 5UBB chain A(all domains)
UniProt: Q5VVY1 (all domains)
Gene: NTMT2

Molecule: Alpha N-terminal protein methyltransferase 1B

3D Structure

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Related Domains

Browse other domains in Methyltransf_PK →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupS-adenosyl-L-methionine-dependent methyltransferases(2003.1.5)

FFamilyMethyltransf_PK(2003.1.5.52)

Ligands

in contact, ≤ 4 Å

AdemetionineSAM
drugDrugBank DB00118
Unknown atom or ionUNX

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF05891Methyltransf_PK

AdoMet dependent proline di-methyltransferase

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 5UBB RCSB PDB: 5UBB PDBe: 5UBB UniProt: Q5VVY1

Downloads

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