ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5b5mo1 - ECOD Domain | ECOD

ECOD/Domains/e5b5mo1

e5b5mo1

UID: 002046455

PDB

Range: o:17-333
PDB: 5B5M chain o(all domains)
UniProt: D2Z0P5 (all domains)
Gene: pufC

Molecule: Photosynthetic reaction center cytochrome c subunit

3D Structure

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Related Domains

Browse other domains in CytoC_RC →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupMultiheme cytochromes(139)

HH-groupPhotosynthetic reaction centre (cytochrome subunit)(139.3)

TT-groupPhotosynthetic reaction centre (cytochrome subunit)(139.3.1)

FFamilyCytoC_RC(139.3.1.1)

Ligands

in contact, ≤ 4 Å

FerrohemeHEM
drugDrugBank DB18267
Strontium ionSR
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF02276CytoC_RC

Photosynthetic reaction centre cytochrome C subunit

ClanCL0317Multiheme_cytos

External Links

ECOD PDB View: 5B5M RCSB PDB: 5B5M PDBe: 5B5M UniProt: D2Z0P5

Downloads

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