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PDB 5B5M

X-RAY DIFFRACTION3.30 Å72 chains74 ECOD domains
View in RCSB PDB

3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain 0LH1 beta polypeptideview chain
1 domain
Chain 1LH1 alpha polypeptideview chain
1 domain
Chain 2LH1 beta polypeptideview chain
1 domain
Chain 3LH1 alpha polypeptideview chain
1 domain
Chain 4LH1 beta polypeptideview chain
1 domain
Chain 5LH1 alpha polypeptideview chain
1 domain
Chain 6LH1 beta polypeptideview chain
1 domain
Chain 7LH1 alpha polypeptideview chain
1 domain
Chain 8LH1 beta polypeptideview chain
1 domain
Chain 9LH1 alpha polypeptideview chain
1 domain
Chain ALH1 alpha polypeptideview chain
1 domain
Chain AALH1 alpha polypeptideview chain
1 domain
Chain ABLH1 beta polypeptideview chain
1 domain
Chain ACLH1 alpha polypeptideview chain
1 domain
Chain ADLH1 beta polypeptideview chain
1 domain
Chain AELH1 alpha polypeptideview chain
1 domain
Chain AFLH1 beta polypeptideview chain
1 domain
Chain AGLH1 alpha polypeptideview chain
1 domain
Chain AHLH1 beta polypeptideview chain
1 domain
Chain AILH1 alpha polypeptideview chain
1 domain
Chain AJLH1 beta polypeptideview chain
1 domain
Chain AKLH1 alpha polypeptideview chain
1 domain
Chain ALLH1 beta polypeptideview chain
1 domain
Chain BLH1 beta polypeptideview chain
1 domain
Chain cLH1 beta polypeptideview chain
1 domain
Chain CPhotosynthetic reaction center cytochrome c subunitview chain
1 domain
Chain dLH1 alpha polypeptideview chain
1 domain
Chain DLH1 alpha polypeptideview chain
1 domain
Chain eLH1 beta polypeptideview chain
1 domain
Chain ELH1 beta polypeptideview chain
1 domain
Chain fLH1 alpha polypeptideview chain
1 domain
Chain FLH1 alpha polypeptideview chain
1 domain
Chain gLH1 beta polypeptideview chain
1 domain
Chain GLH1 beta polypeptideview chain
1 domain
Chain hLH1 alpha polypeptideview chain
1 domain
Chain HPhotosynthetic reaction center H subunitview chain
2 domains
Chain iLH1 beta polypeptideview chain
1 domain
Chain ILH1 alpha polypeptideview chain
1 domain
Chain jLH1 alpha polypeptideview chain
1 domain
Chain JLH1 beta polypeptideview chain
1 domain
Chain kLH1 beta polypeptideview chain
1 domain
Chain KLH1 alpha polypeptideview chain
1 domain
Chain lLH1 alpha polypeptideview chain
1 domain
Chain LPhotosynthetic reaction center L subunitview chain
1 domain
Chain mLH1 alpha polypeptideview chain
1 domain
Chain MPhotosynthetic reaction center M subunitview chain
1 domain
Chain nLH1 beta polypeptideview chain
1 domain
Chain NLH1 beta polypeptideview chain
1 domain
Chain oPhotosynthetic reaction center cytochrome c subunitview chain
1 domain
Chain OLH1 alpha polypeptideview chain
1 domain
Chain pLH1 alpha polypeptideview chain
1 domain
Chain PLH1 beta polypeptideview chain
1 domain
Chain qLH1 beta polypeptideview chain
1 domain
Chain QLH1 alpha polypeptideview chain
1 domain
Chain rLH1 alpha polypeptideview chain
1 domain
Chain RLH1 beta polypeptideview chain
1 domain
Chain sLH1 beta polypeptideview chain
1 domain
Chain SLH1 alpha polypeptideview chain
1 domain
Chain tPhotosynthetic reaction center H subunitview chain
2 domains
Chain TLH1 beta polypeptideview chain
1 domain
Chain uLH1 alpha polypeptideview chain
1 domain
Chain ULH1 alpha polypeptideview chain
1 domain
Chain vLH1 beta polypeptideview chain
1 domain
Chain VLH1 beta polypeptideview chain
1 domain
Chain wLH1 alpha polypeptideview chain
1 domain
Chain WLH1 alpha polypeptideview chain
1 domain
Chain xPhotosynthetic reaction center L subunitview chain
1 domain
Chain XLH1 beta polypeptideview chain
1 domain
Chain yPhotosynthetic reaction center M subunitview chain
1 domain
Chain YLH1 alpha polypeptideview chain
1 domain
Chain zLH1 beta polypeptideview chain
1 domain
Chain ZLH1 beta polypeptideview chain
1 domain

All Domains (74)

#ChainDomain IDRangeFamilyClassification
10e5b5m010:7-46LHC5074 → 5074.1 → 5074.1.1
21e5b5m111:2-61LHC5074 → 5074.1 → 5074.1.1
32e5b5m212:7-46LHC5074 → 5074.1 → 5074.1.1
43e5b5m313:2-61LHC5074 → 5074.1 → 5074.1.1
54e5b5m414:7-46LHC5074 → 5074.1 → 5074.1.1
65e5b5m515:2-61LHC5074 → 5074.1 → 5074.1.1
76e5b5m616:7-46LHC5074 → 5074.1 → 5074.1.1
87e5b5m717:2-61LHC5074 → 5074.1 → 5074.1.1
98e5b5m818:7-46LHC5074 → 5074.1 → 5074.1.1
109e5b5m919:2-61LHC5074 → 5074.1 → 5074.1.1
11Ae5b5mA1A:2-61LHC5074 → 5074.1 → 5074.1.1
12AAe5b5mAA1AA:2-61LHC5074 → 5074.1 → 5074.1.1
13ABe5b5mAB1AB:7-46LHC5074 → 5074.1 → 5074.1.1
14ACe5b5mAC1AC:2-61LHC5074 → 5074.1 → 5074.1.1
15ADe5b5mAD1AD:7-46LHC5074 → 5074.1 → 5074.1.1
16AEe5b5mAE1AE:2-61LHC5074 → 5074.1 → 5074.1.1
17AFe5b5mAF1AF:7-46LHC5074 → 5074.1 → 5074.1.1
18AGe5b5mAG1AG:2-61LHC5074 → 5074.1 → 5074.1.1
19AHe5b5mAH1AH:7-46LHC5074 → 5074.1 → 5074.1.1
20AIe5b5mAI1AI:2-61LHC5074 → 5074.1 → 5074.1.1
21AJe5b5mAJ1AJ:7-46LHC5074 → 5074.1 → 5074.1.1
22AKe5b5mAK1AK:2-61LHC5074 → 5074.1 → 5074.1.1
23ALe5b5mAL1AL:7-46LHC5074 → 5074.1 → 5074.1.1
24Be5b5mB1B:7-46LHC5074 → 5074.1 → 5074.1.1
25ce5b5mc1c:7-46LHC5074 → 5074.1 → 5074.1.1
26Ce5b5mC1C:17-333CytoC_RC139 → 139.3 → 139.3.1
27de5b5md1d:2-61LHC5074 → 5074.1 → 5074.1.1
28De5b5mD1D:2-61LHC5074 → 5074.1 → 5074.1.1
29ee5b5me1e:7-46LHC5074 → 5074.1 → 5074.1.1
30Ee5b5mE1E:7-46LHC5074 → 5074.1 → 5074.1.1
31fe5b5mf1f:2-61LHC5074 → 5074.1 → 5074.1.1
32Fe5b5mF1F:2-61LHC5074 → 5074.1 → 5074.1.1
33ge5b5mg1g:7-46LHC5074 → 5074.1 → 5074.1.1
34Ge5b5mG1G:7-46LHC5074 → 5074.1 → 5074.1.1
35he5b5mh1h:2-61LHC5074 → 5074.1 → 5074.1.1
36He5b5mH1H:35-259Photosynthetic reaction centre, H-chain N-terminal region / PRC-barrel domain4 → 4.6 → 4.6.1
37He5b5mH2H:2-34PRCH5002 → 5002.1 → 5002.1.1
38ie5b5mi1i:7-46LHC5074 → 5074.1 → 5074.1.1
39Ie5b5mI1I:2-61LHC5074 → 5074.1 → 5074.1.1
40je5b5mj1j:2-61LHC5074 → 5074.1 → 5074.1.1
41Je5b5mJ1J:7-46LHC5074 → 5074.1 → 5074.1.1
42ke5b5mk1k:7-46LHC5074 → 5074.1 → 5074.1.1
43Ke5b5mK1K:2-61LHC5074 → 5074.1 → 5074.1.1
44le5b5ml1l:2-61LHC5074 → 5074.1 → 5074.1.1
45Le5b5mL1L:2-281Photo_RC5037 → 5037.1 → 5037.1.1
46me5b5mm1m:2-61LHC5074 → 5074.1 → 5074.1.1
47Me5b5mM1M:2-319Photo_RC5037 → 5037.1 → 5037.1.1
48ne5b5mn1n:7-46LHC5074 → 5074.1 → 5074.1.1
49Ne5b5mN1N:7-46LHC5074 → 5074.1 → 5074.1.1
50oe5b5mo1o:17-333CytoC_RC139 → 139.3 → 139.3.1
51Oe5b5mO1O:2-61LHC5074 → 5074.1 → 5074.1.1
52pe5b5mp1p:2-61LHC5074 → 5074.1 → 5074.1.1
53Pe5b5mP1P:7-46LHC5074 → 5074.1 → 5074.1.1
54qe5b5mq1q:7-46LHC5074 → 5074.1 → 5074.1.1
55Qe5b5mQ1Q:2-61LHC5074 → 5074.1 → 5074.1.1
56re5b5mr1r:2-61LHC5074 → 5074.1 → 5074.1.1
57Re5b5mR1R:7-46LHC5074 → 5074.1 → 5074.1.1
58se5b5ms1s:7-46LHC5074 → 5074.1 → 5074.1.1
59Se5b5mS1S:2-61LHC5074 → 5074.1 → 5074.1.1
60te5b5mt1t:35-259Photosynthetic reaction centre, H-chain N-terminal region / PRC-barrel domain4 → 4.6 → 4.6.1
61te5b5mt2t:2-34PRCH5002 → 5002.1 → 5002.1.1
62Te5b5mT1T:7-46LHC5074 → 5074.1 → 5074.1.1
63ue5b5mu1u:2-61LHC5074 → 5074.1 → 5074.1.1
64Ue5b5mU1U:2-61LHC5074 → 5074.1 → 5074.1.1
65ve5b5mv1v:7-46LHC5074 → 5074.1 → 5074.1.1
66Ve5b5mV1V:7-46LHC5074 → 5074.1 → 5074.1.1
67we5b5mw1w:2-61LHC5074 → 5074.1 → 5074.1.1
68We5b5mW1W:2-61LHC5074 → 5074.1 → 5074.1.1
69xe5b5mx1x:2-281Photo_RC5037 → 5037.1 → 5037.1.1
70Xe5b5mX1X:7-46LHC5074 → 5074.1 → 5074.1.1
71ye5b5my1y:2-319Photo_RC5037 → 5037.1 → 5037.1.1
72Ye5b5mY1Y:2-61LHC5074 → 5074.1 → 5074.1.1
73ze5b5mz1z:7-46LHC5074 → 5074.1 → 5074.1.1
74Ze5b5mZ1Z:7-46LHC5074 → 5074.1 → 5074.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors