ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5b5mt2 - ECOD Domain | ECOD

ECOD/Domains/e5b5mt2

e5b5mt2

UID: 002046463

PDB

Range: t:2-34
PDB: 5B5M chain t(all domains)
UniProt: D2Z0P9 (all domains)
Gene: puhA

Molecule: Photosynthetic reaction center H subunit

3D Structure

Loading viewer...

Related Domains

Browse other domains in PRCH →

Classification

AArchitectureextended segments(a.20)

XX-groupPhotosystem II reaction centre subunit H, transmembrane region(5002)

HH-groupPhotosystem II reaction centre subunit H, transmembrane region(5002.1)

TT-groupPhotosystem II reaction centre subunit H, transmembrane region(5002.1.1)

FFamilyPRCH(5002.1.1.1)

Ligands

in contact, ≤ 4 Å

1,2-dihexadecanoyl-sn-glycero-3-phosphoethanolaminePEF
drugDrugBank DB01728

+ 1 additive (Phosphate ion)

Phosphate ionPO4
DrugBank DB14523

Pfam Families

Photosynthetic reaction centre, H-chain N-terminal region

ClanCL0350PRC-barrel

External Links

ECOD PDB View: 5B5M RCSB PDB: 5B5M PDBe: 5B5M UniProt: D2Z0P9

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Shown in the structure viewer. Drug annotations from DrugDomain.