ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5ih3C2 - ECOD Domain | ECOD

ECOD/Domains/e5ih3C2

e5ih3C2

UID: 002048244

PDB

Range: C:136-289
PDB: 5IH3 chain C(all domains)
UniProt: Q9WVG6 (all domains)
Gene: Carm1

Molecule: Histone-arginine methyltransferase CARM1

3D Structure

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Related Domains

Browse other domains in PrmA →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupS-adenosyl-L-methionine-dependent methyltransferases(2003.1.5)

FFamilyPrmA(2003.1.5.55)

Ligands

in contact, ≤ 4 Å

1,2-DimethoxyethaneDXE
drugDrugBank DB01749
S-adenosyl-L-homocysteineSAH
drugDrugBank DB01752

+ 2 additives (1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER)

Pfam Families

Ribosomal protein L11 methyltransferase (PrmA)

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 5IH3 RCSB PDB: 5IH3 PDBe: 5IH3 UniProt: Q9WVG6

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

1,2-ETHANEDIOLEDO
DI(HYDROXYETHYL)ETHERPEG

Shown in the structure viewer. Drug annotations from DrugDomain.